Sample name: |
2018 HBG 007 A
|
Collection timestamp: |
2018-08-09T12:00:00-04:00
|
Location [GAZ ontology]: |
Lake Erie
|
NOAA site: | |
Reads: | |
Sample type: |
metagenome
|
Has paired data: |
False
|
SRA accession: | SRR23363405 |
Amplicon target: | |
Forward primer: | |
Reverse primer: | |
Read count: | |
Reads mapped contigs: | |
Reads mapped genes: | |
NCBI BioProject: | PRJNA932433 |
NCBI BioSample: | SAMN33192214 |
GOLD analysis projectID: | |
GOLD sequencing projectID: | |
JGI study: | |
JGI biosample: | |
GAZ id: |
GAZ:00003932
|
Latitude [decimal degrees]: |
41.6313
|
Longitude [decimal degrees]: |
-83.03150
|
ENVO Ontology ID [ENVO ontology]: |
large freshwater lake biome [ENVO:00000891]
|
Env local scale: |
Lake [ENVO:00000020]
|
Sample material [ENVO ontology]: |
water [ENVO:00002006]
|
Keywords: |
HABs
|
Sample collection depth: |
5.09 m
|
Sediment depth: | |
Depth at sampling location: | |
Filter retained pore size: | |
Pre-filter pore size: | |
pH: |
8.74
|
Temperature: |
25.39 °C
|
Calcium: | |
Potassium: | |
Phosphate: | |
Magnesium: | |
Ammonium: |
0.836 mg/L
|
Dissolved oxygen: |
8.4 mg/L
|
Conductivity: |
280.7 μS/cm
|
Secchi depth: |
2 m
|
Turbidity: |
1.34 NTU
|
Particulate microcystin: |
2.91 μg/L
|
Dissolved Microcystin: |
0.36 μg/L
|
Phycocyanin: | |
Microcystin: |
3.27 μg/L
|
Anatoxin: | |
Chlorophyll: |
11.58 μg/L
|
Total phosphorus: |
0.476 μg/L
|
Total dissolved phosphorus: | |
Soluble reactive phosphorus: | |
Ammonia: | |
Nitrate and nitrite: |
34.436 mg/L
|
Nitrate: |
34.436 mg/L
|
Nitrite: | |
Urea: | |
Particulate organic carbon: | |
Particulate organic nitrogen: | |
Dissolved organic carbon: | |
DOM absorbance at 400 nm: | |
Hydrogen peroxide: | |
Suspended particulate matter: | |
Suspended volitile solids: | |
Microcystis cell count: | |
Planktothrix cell count: | |
Anabaena cell count: | |
Cylidrospermopsis cell count: | |
Ice cover: | |
Chlorophyll a fluorescence: |
0.34 rel AU
|
Sample collection device: | |
Modified or experimental: |
False
|
Is isolate: |
False
|
Negative control [TRUE / FALSE]: |
False
|
Mock community [TRUE / FALSE]: |
False
|
Volume filtered: | |
Filtration duration [hh:mm:ss]: | |
qPCR; Phytoxigene total cyanobacteria: | |
qPCR; Phytoxigene mcyE: | |
qPCR; Phytoxigene sxtA: | |
Silicate: |
23.888 μmol/L
|
Total nitrogen: |
70.464 μmol/L
|
Green algae: |
0 µg/L
|
Bluegreen algae: |
3.71 µg/L
|
Diatoms: |
0.17 µg/L
|
Cryptophyta: |
3.05 µg/L
|
Total microcystin: |
0.1 μg/L
|
Attenuation: | |
Transmission: | |
Photosynthetically active radiation: | |
Sky: | |
Wave height: | |
Wind speed: | |
Phycocyanin fluoresence : | |
Salinity measured using a sonde: | |
Atmospheric temperature: | |
Particulate cylindrospermopsin: | |
Redox potential-ORP: | |
Replicate ID: | |
AlgaeTorch Cyanobacterial abundance: | |
AlgaeTorch total: | |
Environment Canada Sampling site: | |
Environment Kenya Sampling site: | |
Amended site name: | |
Station description about location: | |