Sample name: |
2018 HSL 004 A
|
Collection timestamp: |
2018-08-09T08:26:00-04:00
|
Location [GAZ ontology]: |
Lake Erie
|
NOAA site: | |
Reads: | |
Sample type: |
metagenome
|
Has paired data: |
False
|
SRA accession: | SRR23363393 |
Amplicon target: | |
Forward primer: | |
Reverse primer: | |
Read count: | |
Reads mapped contigs: | |
Reads mapped genes: | |
NCBI BioProject: | PRJNA932433 |
NCBI BioSample: | SAMN33192225 |
GOLD analysis projectID: | |
GOLD sequencing projectID: | |
JGI study: | |
JGI biosample: | |
GAZ id: |
GAZ:00003932
|
Latitude [decimal degrees]: |
41.7016
|
Longitude [decimal degrees]: |
-82.85317
|
ENVO Ontology ID [ENVO ontology]: |
large freshwater lake biome [ENVO:00000891]
|
Env local scale: |
Lake [ENVO:00000020]
|
Sample material [ENVO ontology]: |
water [ENVO:00002006]
|
Keywords: |
HABs
|
Sample collection depth: |
10.55 m
|
Sediment depth: | |
Depth at sampling location: | |
Filter retained pore size: | |
Pre-filter pore size: | |
pH: |
8.44
|
Temperature: |
24.83 °C
|
Calcium: | |
Potassium: | |
Phosphate: | |
Magnesium: | |
Ammonium: |
0.383 mg/L
|
Dissolved oxygen: |
8.15 mg/L
|
Conductivity: |
275.1 μS/cm
|
Secchi depth: | |
Turbidity: |
7.11 NTU
|
Particulate microcystin: |
2.73 μg/L
|
Dissolved Microcystin: |
0.27 μg/L
|
Phycocyanin: | |
Microcystin: |
3 μg/L
|
Anatoxin: | |
Chlorophyll: |
15.28 μg/L
|
Total phosphorus: |
0.79 μg/L
|
Total dissolved phosphorus: | |
Soluble reactive phosphorus: | |
Ammonia: | |
Nitrate and nitrite: |
19.13 mg/L
|
Nitrate: |
19.13 mg/L
|
Nitrite: | |
Urea: | |
Particulate organic carbon: | |
Particulate organic nitrogen: | |
Dissolved organic carbon: | |
DOM absorbance at 400 nm: | |
Hydrogen peroxide: | |
Suspended particulate matter: | |
Suspended volitile solids: | |
Microcystis cell count: | |
Planktothrix cell count: | |
Anabaena cell count: | |
Cylidrospermopsis cell count: | |
Ice cover: | |
Chlorophyll a fluorescence: |
0.33 rel AU
|
Sample collection device: | |
Modified or experimental: |
False
|
Is isolate: |
False
|
Negative control [TRUE / FALSE]: |
False
|
Mock community [TRUE / FALSE]: |
False
|
Volume filtered: | |
Filtration duration [hh:mm:ss]: | |
qPCR; Phytoxigene total cyanobacteria: | |
qPCR; Phytoxigene mcyE: | |
qPCR; Phytoxigene sxtA: | |
Silicate: |
38.504 μmol/L
|
Total nitrogen: |
54.595 μmol/L
|
Green algae: |
0 µg/L
|
Bluegreen algae: |
5.36 µg/L
|
Diatoms: |
0 µg/L
|
Cryptophyta: |
2.8 µg/L
|
Total microcystin: |
0.1 μg/L
|
Attenuation: | |
Transmission: | |
Photosynthetically active radiation: | |
Sky: | |
Wave height: | |
Wind speed: | |
Phycocyanin fluoresence : | |
Salinity measured using a sonde: | |
Atmospheric temperature: | |
Particulate cylindrospermopsin: | |
Redox potential-ORP: | |
Replicate ID: | |
AlgaeTorch Cyanobacterial abundance: | |
AlgaeTorch total: | |
Environment Canada Sampling site: | |
Environment Kenya Sampling site: | |
Amended site name: | |
Station description about location: | |