Sample: LE WWC BNZ 88

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Details
Dataset:Western and Central Lake Erie[…] - Zepernick et al. 2022
Sample name: LE WWC BNZ 88
Collection timestamp: 2019-05-02
Location [GAZ ontology]: Lake Erie
NOAA site:
Reads:
Sample type: metatranscriptome
Has paired data: True
SRA accession:
Amplicon target:
Forward primer:
Reverse primer:
Read count:
Reads mapped contigs:
Reads mapped genes:
NCBI BioProject:
NCBI BioSample:
GOLD analysis projectID:
GOLD sequencing projectID:
JGI study: Gs0142002
JGI biosample: Gb0293493
GAZ id: GAZ:00003932
Latitude [decimal degrees]: 41.5186
Longitude [decimal degrees]: -82.64060
ENVO Ontology ID [ENVO ontology]: large freshwater lake biome [ENVO:00000891]
Env local scale: Lake [ENVO:00000020]
Sample material [ENVO ontology]: water [ENVO:00002006]
Keywords:
Sample collection depth: 10 m
Sediment depth:
Depth at sampling location:
Filter retained pore size: 0.22 μm
Pre-filter pore size:
pH:
Temperature:
Calcium:
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Magnesium:
Ammonium:
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Secchi depth:
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Phycocyanin:
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Anatoxin:
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Ammonia:
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Urea:
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DOM absorbance at 400 nm:
Hydrogen peroxide:
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Microcystis cell count:
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Cylidrospermopsis cell count:
Ice cover:
Chlorophyll a fluorescence:
Sample collection device:
Modified or experimental: False
Is isolate:
Negative control [TRUE / FALSE]:
Mock community [TRUE / FALSE]:
Volume filtered:
Filtration duration [hh:mm:ss]:
qPCR; Phytoxigene total cyanobacteria:
qPCR; Phytoxigene mcyE:
qPCR; Phytoxigene sxtA:
Silicate:
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Green algae:
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Cryptophyta:
Total microcystin:
Attenuation:
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Sky:
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Phycocyanin fluoresence :
Salinity measured using a sonde:
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Particulate cylindrospermopsin:
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Environment Canada Sampling site:
Environment Kenya Sampling site:
Amended site name:
Station description about location: