|
| Sample name: |
Lake Erie CCB epilimnion July 2011
|
| Collection timestamp: |
2011-07-19
|
| Location [GAZ ontology]: |
Lake Erie
|
| NOAA site: | |
| Reads: | |
| Sample type: |
metagenome
|
| Has paired data: |
False
|
|
| Amplicon target: | |
| Forward primer: | |
| Reverse primer: | |
| Read count: | |
| Reads mapped contigs: | |
| Reads mapped genes: | |
| NCBI BioProject: | PRJNA366505 |
| NCBI BioSample: | SAMN06268982 |
| GOLD analysis projectID: | Ga0000990 |
| GOLD sequencing projectID: | Gp0054388 |
| JGI study: |
Gs0053068
|
| JGI biosample: |
Gb0054388
|
| GAZ id: |
GAZ:00003932
|
| Latitude [decimal degrees]: |
41.7700
|
| Longitude [decimal degrees]: |
-81.73000
|
| ENVO Ontology ID [ENVO ontology]: |
large freshwater lake biome [ENVO:00000891]
|
| Env local scale: |
Lake [ENVO:00000020]
|
| Sample material [ENVO ontology]: |
water [ENVO:00002006]
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| Keywords: | |
| Sample collection depth: |
5 m
|
| Sediment depth: | |
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| pH: | |
| Temperature: | |
| Calcium: | |
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| Conductivity: | |
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| Particulate microcystin: | |
| Dissolved Microcystin: | |
| Phycocyanin: | |
| Microcystin: | |
| Anatoxin: | |
| Chlorophyll: | |
| Total phosphorus: | |
| Total dissolved phosphorus: | |
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| Ammonia: | |
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| Nitrate: | |
| Nitrite: | |
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| Microcystis cell count: | |
| Planktothrix cell count: | |
| Anabaena cell count: | |
| Cylidrospermopsis cell count: | |
| Ice cover: | |
| Chlorophyll a fluorescence: | |
| Sample collection device: | |
| Modified or experimental: |
False
|
| Is isolate: | |
| Negative control [TRUE / FALSE]: | |
| Mock community [TRUE / FALSE]: | |
| Volume filtered: | |
| Filtration duration [hh:mm:ss]: | |
| qPCR; Phytoxigene total cyanobacteria: | |
| qPCR; Phytoxigene mcyE: | |
| qPCR; Phytoxigene sxtA: | |
| Silicate: | |
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| Green algae: | |
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| Cryptophyta: | |
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| Transmission: | |
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| Sky: | |
| Wave height: | |
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| Phycocyanin fluoresence: | |
| Salinity measured using a sonde [parts per thousand]: | |
| Atmospheric temperature: | |
| Particulate cylindrospermopsin: | |
| Redox potential-ORP [millivolts]: | |
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| Environment Canada Sampling site: | |
| Environment Kenya Sampling site: | |
| Amended site name: | |
| Station description about location: | |