Sample: N2703

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Details
Dataset:Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
Sample name: N2703
Collection timestamp: 2014-11-17
Location [GAZ ontology]: Niagra
NOAA site:
Reads:
Sample type: amplicon
Has paired data: False
SRA accession:SRS2375539
Amplicon target: 16S V3-V4
Forward primer: S-D-Bact-0341-b-S-17
Reverse primer: S-D-Bact-0785-a-A-21
Read count:
Reads mapped contigs:
Reads mapped genes:
NCBI BioProject:PRJNA393519
NCBI BioSample:SAMN07361684
GOLD analysis projectID:
GOLD sequencing projectID:
JGI study:
JGI biosample:
GAZ id: GAZ:00069952
Latitude [decimal degrees]: 43.0838
Longitude [decimal degrees]: -79.4748
ENVO Ontology ID [ENVO ontology]: watershed [ENVO:00000292]
Env local scale: stream [00000023]
Sample material [ENVO ontology]: water surface [ENVO:01001191]
Keywords:
Sample collection depth: 0 m
Sediment depth:
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pH:
Temperature:
Calcium:
Potassium:
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Magnesium:
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Secchi depth:
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Particulate microcystin:
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Phycocyanin:
Microcystin:
Anatoxin:
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DOM absorbance at 400 nm:
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Cylidrospermopsis cell count:
Ice cover:
Chlorophyll a fluorescence:
Sample collection device:
Modified or experimental: False
Is isolate:
Negative control [TRUE / FALSE]:
Mock community [TRUE / FALSE]:
Volume filtered:
Filtration duration [hh:mm:ss]:
qPCR; Phytoxigene total cyanobacteria:
qPCR; Phytoxigene mcyE:
qPCR; Phytoxigene sxtA:
Silicate:
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Salinity measured using a sonde:
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Environment Canada Sampling site:
Environment Kenya Sampling site:
Amended site name:
Station description about location: