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Showing 5098 samples with:

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Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
E2014-0102-100LTR metatranscriptome — Lake Erie / WE12 41.7033 -83.2583 2014-09-23 2014 Western Lake Erie Metagenomes and[…] - Yancey et al. 2022
ASHCO metatranscriptome — Lake Erie — — Diel metatranscriptomes from 10-15m[…] - Davenport et al. 2019
HU37 amplicon 16S V3-V5 Lake Huron 44.7617 -82.78351 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
HU38 amplicon 16S V3-V5 Lake Huron 44.7400 -82.06017 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
LE WWC BNZ 39 metatranscriptome — Lake Erie 42.4305 -81.20620 2020-05-01 Western and Central Lake Erie[…] - Zepernick et al. 2022
HU54 amplicon 16S V3-V5 Lake Huron 45.5167 -83.41717 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
ON33M_SRF_Aug2013 amplicon 16S V4-V5 Lake Ontario 43.5967 -78.80167 2013-08-12 Transects across the Laurentian Great[…] - Paver et al. 2019
HU951 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
SU17_SRF_Aug2013 amplicon 16S V4 Lake Superior 47.1644 -89.66194 2013-08-21 Transects across the Laurentian Great[…] - Paver et al. 2019
NegCNTRL10_16S amplicon 16S V4 — — 2018-12-10 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
HU952 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
HU953 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
MI18 amplicon 16S V3-V5 Lake Michigan 42.7343 -86.99967 2008-08-02 Sediment samples from across the[…] - Winters et al. 2014
SC21_50_Metagenome metagenome — Lake Erie 41.8466 -83.24301 2018-08-31T00:52:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
MI40 amplicon 16S V3-V5 Lake Michigan 44.7603 -86.96601 2008-08-03 Sediment samples from across the[…] - Winters et al. 2014
SC50_50_Metagenome metagenome — Lake Erie 41.8249 -83.21184 2018-08-24T15:05:02-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
ON25 amplicon 16S V3-V5 Lake Ontario 43.5167 -79.08001 2008-08-12 Sediment samples from across the[…] - Winters et al. 2014
Zymo_Std_Even_18S-ITS amplicon 18S ITS — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Zymo_Log_16S_singleindex_2019 amplicon 16S V4 — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
3G_3_22_16S_singleindex_2019 amplicon 16S V4 Lake Erie 41.8242 -83.30940 2019-08-20T10:07:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
ON41 amplicon 16S V3-V5 Lake Ontario 43.7167 -78.02717 2008-08-12 Sediment samples from across the[…] - Winters et al. 2014
SC35_22_18S-ITS amplicon 18S ITS — — 2018-08-28T14:24:49-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Zd6424a amplicon COI Lake Superior 46.8184 -92.00002 June 2016 Western Lake Superior, Lake tow sample - Meredith et al. 2021
SU011 amplicon 16S V3-V5 Lake Superior 46.9927 -85.16050 2008-08-20 Sediment samples from across the[…] - Winters et al. 2014
LE WWC BNZ 29 metatranscriptome — Lake Erie 42.4295 -81.20440 2020-05-22 Western and Central Lake Erie[…] - Zepernick et al. 2022