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Found 5098 samples with:

Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
SAMN03436866 metagenome Lake Michigan 41.7189 -87.52560 2014-07-08 Lake Michigan near Chicago-area beaches - Sible et al. 2015
EM_9_RNA metatranscriptome Lake Superior 47.597778 -86.575278 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
rr872p4 amplicon Lake Mendota 43.0995 -89.4045 2015-10-04 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
LE17-10 metagenome Lake Erie 41.762 -83.365 2017-09-18 Microcystis genomes from the Western[…] - Yancey et al. 2023
SC54_22_Metagenome metagenome Lake Erie 41.9108 -83.21033 2018-08-23T23:52:54-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC53_50_Metagenome metagenome Lake Erie 41.9123 -83.20099 2018-08-24T06:17:45-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
NFSC3PRO3 amplicon Maumee River and mock community[…] - Klymus et al. 2017
SC60_50_Metagenome metagenome 2018-08-21T14:00:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC56_50_Metagenome metagenome Lake Erie 41.9053 -83.22446 2018-08-23T17:38:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
rr925p4 amplicon Lake Mendota 43.0995 -89.4045 2013-05-16 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
LE WWC BNZ 39 metatranscriptome Lake Erie 42.4305 -81.20620 2020-05-01 Western and Central Lake Erie[…] - Zepernick et al. 2022
DNA_FWM_4 metagenome Lake Superior 47.033333 -91.266667 2019-06-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
Zymo_Std_Even_Metagenome metagenome Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC60_22_Metagenome metagenome 2018-08-21T14:00:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
LE WWC BNZ 37 metatranscriptome Lake Erie 42.4295 -81.20440 2020-05-22 Western and Central Lake Erie[…] - Zepernick et al. 2022
BWT_3_22_Metagenome_2019 metagenome Lake Erie 41.7311 -83.29880 2019-08-21T08:07:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
BWT_4_50_Metagenome_2019 metagenome Lake Erie 41.7347 -83.30590 2019-08-21T13:48:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
3G_2_Aug_23_50_Metagenome_2019 metagenome Lake Erie 41.8338 -83.27890 2019-08-23T09:40:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
ASHCO metatranscriptome Lake Erie 41.6996 -83.2941 2014-08-28T16:00:00-04:00 Diel metatranscriptomes from 10-15m[…] - Davenport et al. 2019
blw_4_pls_13_22_Metagenome_2019 metagenome Lake Erie 41.7939 -83.13310 2019-08-22T15:30:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
blw_4_pls_13_50_Metagenome_2019 metagenome Lake Erie 41.7939 -83.13310 2019-08-22T15:30:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC11_22_Metagenome_2019 metagenome Lake Erie 41.7439 -83.13597 2019-08-26T18:15:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
WE13 pre-bloom multiplex run 2 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
BWT_2G_3_22_Metagenome_2019 metagenome Lake Erie 41.7344 -83.30050 2019-08-21T11:00:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Run3.HR.APO.NT.b amplicon Huron River 42.3127 -83.79000 2013-03-18T10:30:00-04:00 Discrete depth samples in Lake Huron,[…] - McCarthy et al. 2015