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Found 5098 samples with:

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Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
Brevibacillus parabrevis strain LEw-1238 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
SC35_50_16S amplicon 16S V4 — — 2018-08-28T14:24:49-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC34_22_16S amplicon 16S V4 — — 2018-08-28T16:52:34-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
BIM8M amplicon — — — Maumee River and mock community[…] - Klymus et al. 2017
Acidovorax facilis train LEw-2 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
NegCNTRL9_Metagenome metagenome — — — 2018-12-07 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
BIE_Kit_Control amplicon — Lake Erie — — Microcystis colony communities evaluated[…] - Smith et al. 2021
SC35_22_18S-ITS amplicon 18S ITS — — 2018-08-28T14:24:49-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
reagent blank 1 metagenome — — — 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
SC35_22_16S amplicon 16S V4 — — 2018-08-28T14:24:49-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC34_50_16S amplicon 16S V4 — — 2018-08-28T16:52:34-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SPSC3PRO1 amplicon — — — Maumee River and mock community[…] - Klymus et al. 2017
negative control metagenome — — — 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
NegCNTRL10_16S amplicon 16S V4 — — 2018-12-10 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC02_22_16S amplicon 16S V4 — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC60_22_18S-ITS amplicon 18S ITS — — 2018-08-21T14:00:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Pseudomonas sp. strain LEw-1033 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
SC60_22_16S amplicon 16S V4 — — 2018-08-21T14:00:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC58_50_16S amplicon 16S V4 — — 2018-08-22T18:03:30-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC59_50_18S-ITS_dualindex_2019 amplicon 18S ITS — — 2019-08-15T14:32:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Bacillus thuringiensis strain LEw-2010 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
SC60_50_16S amplicon 16S V4 — — 2018-08-21T14:00:24-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
NegCNTRL8_18S-ITS_dualindex_2019 amplicon 18S ITS — — 2019-11-11 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Zymo_Even_Dilution2_18S-ITS_dualindex_2019 amplicon 18S ITS — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC59_50_16S_dualindex_2019 amplicon 16S V4 — — 2019-08-15T14:32:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022