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Found 5098 samples with:

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Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
MC001 (initial collection site replicate 1) metatranscriptome — Lake Erie 41.71 -83.2971 2013-09-12 2013 transcriptomes from Western Lake Erie[…] - Harke et al. 2016
rr998p4 amplicon — Lake Mendota 43.0995 -89.4045 2018-11-08 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
rr803p4 amplicon — Lake Mendota 43.0995 -89.4045 2001-04-23 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
N2652 amplicon 16S V3-V4 Niagra 42.9947 -79.25010 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
rr297p2 amplicon — Lake Mendota 43.0995 -89.4045 2014-07-17 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
N2651 amplicon 16S V3-V4 Niagra 42.9848 -79.27280 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2650 amplicon 16S V3-V4 Niagra 42.9720 -79.31770 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2649 amplicon 16S V3-V4 Niagra 42.9968 -79.56620 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2648 amplicon 16S V3-V4 Niagra 43.0213 -79.61770 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
rr783p4 amplicon — Lake Mendota 43.0995 -89.4045 2017-08-01 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
DNA_CM_1 metagenome — Lake Superior 48.056667 -87.783333 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
SW_3_RNA metatranscriptome — Lake Superior 46.833333 -90.266667 2019-06-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
CM_2_RNA metatranscriptome — Lake Superior 48.056667 -87.783333 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
DNA_CM_10 metagenome — Lake Superior 48.056667 -87.783333 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
DNA_EM_3 metagenome — Lake Superior 47.597778 -86.575278 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
SW_1_RNA metatranscriptome — Lake Superior 46.833333 -90.266667 2019-06-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
FWM_4_RNA metatranscriptome — Lake Superior 47.033333 -91.266667 2019-06-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
DNA_CM_4 metagenome — Lake Superior 48.056667 -87.783333 2019-05-01 Lake Superior Sediment Metagenomes and[…] - Phillips et al. 2023
N2647 amplicon 16S V3-V4 Niagra 43.0998 -79.81320 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2646 amplicon 16S V3-V4 Niagra 43.1133 -79.88150 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2658 amplicon 16S V3-V4 Niagra 43.0500 -79.13260 2014-10-21 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2657 amplicon 16S V3-V4 Niagra 43.0125 -79.23700 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2656 amplicon 16S V3-V4 Niagra 43.0689 -79.78050 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2655 amplicon 16S V3-V4 Niagra 43.1874 -79.95970 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2654 amplicon 16S V3-V4 Niagra 43.0462 -79.12300 2014-10-20 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019