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Found 5098 samples with:

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Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
SC02_22_16S amplicon 16S V4 — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC02_50_Metagenome metagenome — — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
NegCNTRL10_16S amplicon 16S V4 — — 2018-12-10 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
S. quadricauda CPCC 158_18S-ITS amplicon 18S ITS Lake Erie — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC02_22_18S-ITS amplicon 18S ITS — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SC02_50_18S-ITS amplicon 18S ITS — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
M.aeruginosa LE3_16S amplicon 16S V4 Lake Erie — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
BIE_Kit_Control amplicon — Lake Erie — — Microcystis colony communities evaluated[…] - Smith et al. 2021
BIM8M amplicon — — — Maumee River and mock community[…] - Klymus et al. 2017
NegCNTRL9_Metagenome metagenome — — — 2018-12-07 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
SPSC3PRO1 amplicon — — — Maumee River and mock community[…] - Klymus et al. 2017
Brevibacillus parabrevis strain LEw-1238 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
Acidovorax facilis train LEw-2 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
SC02_50_16S amplicon 16S V4 — — 2018-09-03T13:36:52-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
negative control metagenome — — — 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
Pseudomonas sp. strain LEw-1033 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
Bacillus thuringiensis strain LEw-2010 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
reagent blank 2 metagenome — — — 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
Pseudomonas sp. strain LEw-2166 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
NFSC3PRO3 amplicon — — — Maumee River and mock community[…] - Klymus et al. 2017
NegCNTRL9_16S amplicon 16S V4 — — 2018-12-07 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
reagent blank 1 metagenome — — — 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
Stenotrophomonas maltophilia strain LEw-1278 amplicon 16S Lake Erie — — 16S amplicons for six bacterial[…] - Krishnan et al. 2018
Zymo_Log_18S-ITS_dualindex_2019 amplicon 18S ITS — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
Zymo_Log_16S_singleindex_2019 amplicon 16S V4 — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022