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Found 5098 samples with:

Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
E2014-0086-100LTR metatranscriptome Lake Erie / WE4 41.8264 -83.1939 2014-09-08 2014 Western Lake Erie Metagenomes and[…] - Yancey et al. 2022
LE WWC BNZ 36 metatranscriptome Lake Erie 42.4305 -81.20620 2020-05-01 Western and Central Lake Erie[…] - Zepernick et al. 2022
E2014-0102-100LTR metatranscriptome Lake Erie / WE12 41.7033 -83.2583 2014-09-23 2014 Western Lake Erie Metagenomes and[…] - Yancey et al. 2022
48-Urea-RepB metatranscriptome Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
48h-Bicarbonate-RepA metatranscriptome Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
48h-Bicarbonate RepC metatranscriptome Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
negative control metagenome 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE13 bloom multiplex run 2 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-07-24 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
3G_2_Aug_23_22_Metagenome_2019 metagenome Lake Erie 41.8338 -83.27890 2019-08-23T09:40:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
WE02 bloom multiplex run 2 metagenome Lake Erie / WE2 42.0700 -81.34000 2019-07-24 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
rr433p2 amplicon Lake Mendota 43.0995 -89.4045 2009-11-14 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
WE13 pre-bloom multiplex run 2 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE13 pre-bloom multiplex run 1 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE02 pre-bloom multiplex run 2 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE02 pre-bloom multiplex run 1 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE02 pre-bloom full run 2 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE02 pre-bloom full run 1 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-05-31 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
reagent blank 2 metagenome 2022-02-16 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
WE13 bloom multiplex run 1 metagenome Lake Erie / WE13 42.0700 -81.34000 2019-07-24 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
LE-W13b metatranscriptome Lake Erie / WE13 41.79 -83.15 August 2014 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
LE-W2B metatranscriptome Lake Erie / WE2 41.79 -83.15 August 2014 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
LE WWC BNZ 35 metatranscriptome Lake Erie 42.2817 -81.67170 2020-06-08 Western and Central Lake Erie[…] - Zepernick et al. 2022
WE02 bloom multiplex run 1 metagenome Lake Erie / WE2 42.0700 -81.34000 2019-07-24 Long-read sequencing of 2019 Western[…] - Koeppel et al. 2022
rr339p2 amplicon Lake Mendota 43.0995 -89.4045 2013-08-06 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
SAMN03435841 metagenome Lake Michigan 42.0791 -87.68300 2014-06-24 Lake Michigan near Chicago-area beaches - Sible et al. 2015